Third quarter 2014 Archives by thread
Starting: Tue Jul 1 06:21:33 CEST 2014
Ending: Tue Sep 30 18:39:55 CEST 2014
Messages: 410
- [R-sig-ME] LRT on fixed-effects
Matías Muñoz
- [R-sig-ME] LRT on fixed-effects (Mat?as Mu?oz)
Joel Chan
- [R-sig-ME] R2admb-package
Ben Bolker
- [R-sig-ME] Manipulating Compound Symmetry
Ulf Mertens
- [R-sig-ME] help: different p-values from z-statistic and anova in coxme
ChenChun
- [R-sig-ME] [Lme4-authors] Error in lme4 package
Ben Bolker
- [R-sig-ME] Using glmm for penalised spline model
Richman, Ronald
- [R-sig-ME] glmer convergence warning
bob martin
- [R-sig-ME] Getting the error message: Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate when trying to fit glmer to my data
Nimrod Rubinstein
- [R-sig-ME] How to extract convergence code from lmer object?
Ben Bolker
- [R-sig-ME] gls function - goodness of fit
Hebert, Issac (MNR)
- [R-sig-ME] A question on item random effects
Anastasiia Romanova
- [R-sig-ME] visualising interaction with predict.merMod
Richard Zijdeman
- [R-sig-ME] No residual variance using MCMCglmm
Céline Teplitsky
- [R-sig-ME] Help with pdMat constructors in nlme
Daniel Fulop
- [R-sig-ME] gamm4 model fit error
Nicholas Lange
- [R-sig-ME] Checking modeling assumptions in a binomial GLMM
Ravi Varadhan
- [R-sig-ME] gamm4: extract the (x,y) values of the plotted smooth
Nick Lange
- [R-sig-ME] Very important question regarding the error while using library(lme4)
Ben Bolker
- [R-sig-ME] How to deal with Hessian error if the model only contains binomial (0, 1) fixed factors?
Julia Sommerfeld
- [R-sig-ME] glmmADMB package
Rajibul Mian
- [R-sig-ME] Same variable as both fixed and random
Stephen Mayor
- [R-sig-ME] New book: Beginner's Guide to GAMM with R
Highland Statistics Ltd
- [R-sig-ME] Question regarding the estimation of the correlation between random intercepts and random slopes in the lme4 package
Inga Schwabe
- [R-sig-ME] Significance of Repeatablity Estimates
Ben Bolker
- [R-sig-ME] Accuracy of Va estimates using univariate versus multivariate animal model
chantepie at mnhn.fr
- [R-sig-ME] How is the covariance factor computed?
Christian Brauner
- [R-sig-ME] Negative binomial in glmmadmb
Ben Bolker
- [R-sig-ME] [R] Checking modeling assumptions in a binomial GLMM
Ben Bolker
- [R-sig-ME] question about lme4
Ben Bolker
- [R-sig-ME] LMM: including ranef or not?
Anna-Marie Corman
- [R-sig-ME] lmer Control Parameters Question
Douglas Bates
- [R-sig-ME] Question on semiparametric bootstrap in lme4
Mark Lai
- [R-sig-ME] Mixed effect models for a study with no (real) replication
Marco Plebani
- [R-sig-ME] Error in Profile likelihood based confidence intervals in glmer()
Ravi Varadhan
- [R-sig-ME] MCMCglmm prior specification
Tanya Pennell
- [R-sig-ME] Install flexlambda- and master-lme4 from Github
Christian Brauner
- [R-sig-ME] glmer z values binomial data
Clelia Gasparini
- [R-sig-ME] Mixed-effects Model - LMER - Plot of estimated Mean and CI
Ofer Agai
- [R-sig-ME] Providing starting values for glmer()
Ben Bolker
- [R-sig-ME] MCMCglmm question: multivariate model
Martina Carrete
- [R-sig-ME] Cbind and taxa rows trouble in MCMCglmm
Nick Clark
- [R-sig-ME] longitudinal analysis covariance or mixed model approach
espesser
- [R-sig-ME] MCMCglmm predict function output and interpretation
Justine Smith
- [R-sig-ME] How to check if the interaction term is significant?
geetha venkatesh
- [R-sig-ME] Looking for an effect of relatedness in non-normal data (MCMCglmm)
Megan Bartlett
- [R-sig-ME] Calculating upper and lower confidence limits on a population estimate derived from multiple point estimates
Reuben Smit
- [R-sig-ME] Pseudoreplication in a factorial GLM with a proportional response variable and categorical predictor variables
Berin Mackenzie
- [R-sig-ME] lme and lmer
Nicholas Burgoyne
- [R-sig-ME] lme4.0 vs. lme4 version 1.1-7: newer version returns inflated SE using glmer() with bobyqa optimizer
Chiara Gambi
- [R-sig-ME] Random effect on only one of the response variables in bivariate LMM (MCMCglmm)
Nicolas Rode
- [R-sig-ME] Testing goodness of fit for GLMM model
Yuki Fujita
- [R-sig-ME] Goodness of fit test for GLMM
yuki fujita
- [R-sig-ME] lme4 vs nlme
Nicholas Burgoyne
- [R-sig-ME] Standard errors in generalised linear mixed models?
Felix Suessenbach
- [R-sig-ME] Random slopes for logistic mixed effects model; BoxCox transformation
Yasuaki SHINOHARA
- [R-sig-ME] Weighting observations by sampling size in lmer
Javan Bauder
- [R-sig-ME] parallel MCMCglmm execution
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Ruben Arslan
- [R-sig-ME] parallel MCMCglmm, RNGstreams, starting values & priors
Jarrod Hadfield
- [R-sig-ME] Looking for differences in G structure among factor levels
Diego
- [R-sig-ME] Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate
Kirsty McLaughlin
- [R-sig-ME] FW: Error: (maxstephalfit) PIRLS step-halvings failed to reduce deviance in pwrssUpdate
Kirsty McLaughlin
- [R-sig-ME] autocorrelated errors
Paul Johnson
- [R-sig-ME] lmer not working
Georgina Brennan
- [R-sig-ME] R-sig-mixed-models Digest, Vol 92, Issue 6
Malcolm Fairbrother
- [R-sig-ME] discrepency with paired test when adding concordant paired data to lmer()
E.W.Tobi at lumc.nl
- [R-sig-ME] Model diagnostics for a glmmadmb negative binomial
Reuben Smit
- [R-sig-ME] tolPwrss threshold
Zofia Ecaterina Taranu
- [R-sig-ME] Summary of Subgroups
Shankar Lanke
- [R-sig-ME] Non-conformable arguments while predicting with glmmadmb_model
Reuben Smit
- [R-sig-ME] Group size in mixed/multilevel model: How to obtain weighted effects.
Henrik Singmann
- [R-sig-ME] confidence intervals for random slopes
Bokony Veronika
- [R-sig-ME] using Poisson glmer for non-integer data
Ben Bolker
- [R-sig-ME] Bivariate MCMCglmm with repeated measures
PATRICK, Samantha
- [R-sig-ME] Random slope/intercept without correlation in lmer
Gustaf Granath
- [R-sig-ME] Specifying a repeated-measure design with 3 fully crossed within-subject factors
Michael Cone
- [R-sig-ME] Random effect variance = zero
Aurore Paligot
- [R-sig-ME] Multivariate multinomial in MCMCglmm
Szymek Drobniak
- [R-sig-ME] PredictSE.mer error message
yuki fujita
- [R-sig-ME] "bootstrap runs failed" in bootMer within confint.merMod
Paul Johnson
- [R-sig-ME] random vs fixed effects and glmer model simplification
Saoirse Preston
- [R-sig-ME] lmer random and fixed effect?
Charles Determan Jr
- [R-sig-ME] [R] lqmm - package: Error in f(arg, …) : NA/NaN/Inf in foreign function call (arg 1)
florian k.
- [R-sig-ME] bootMer: 2 questions about generating standard errors in lme4
Jeffrey Evans
- [R-sig-ME] discrepency paired test and lmer()
E.W.Tobi at lumc.nl
- [R-sig-ME] (no subject)
Richa Bharti
- [R-sig-ME] looking for differencies in G structure among factor levels using MCMCglmm
Diego Carmona
- [R-sig-ME] Trivariate MCMCglmm
Gemma Palomar García
- [R-sig-ME] Model tree with random effects
Roelof Coster
- [R-sig-ME] Getting intraclass correlations from a binomial mixed model with logit link
Ulf Köther
- [R-sig-ME] [Lme4-authors] installing 1.1-7
Ben Bolker
- [R-sig-ME] GlMM for ordinal and pseudo replication
Ben Bolker
- [R-sig-ME] Mixed model for ordinal data with pseudo replication
Mehdi Abedi
- [R-sig-ME] question about lme4 and nlme
Niu, Mu
- [R-sig-ME] help on choosin right model for data
Josipa Perković
- [R-sig-ME] Deviance residuals don't sum up to deviance
Roelof Coster
- [R-sig-ME] RE : Generalized mixed effects models
Douglas Bates
- [R-sig-ME] glmer
PLUQUET Thibault
- [R-sig-ME] How to fix the value of random intercepts (lmer/MCMCglmm)
PATRICK, Samantha
- [R-sig-ME] Binomial GLMM or GAMM with random intercept and temporal correlation
Samantha Cox
- [R-sig-ME] multilevel analysis with sample weighted data
Rodrigo Travitzki
- [R-sig-ME] Random effects in clmm() of package ordinal
Christian Brauner
- [R-sig-ME] R-sig-mixed-models Digest, Vol 92, Issue 45
Corey Sparks
- [R-sig-ME] Analysing data with an ordinal response
Christian Brauner
- [R-sig-ME] glmer error: contrasts can only be applied to factors of 2 or more levels
Dan McCloy
- [R-sig-ME] WG: lme4: prediction for glmer model
Meid, Andreas
- [R-sig-ME] Post model fitting checks in Metafor (rma.mv)
Shona Smith
- [R-sig-ME] zeroinflated poisson GLM(M) in JAGS
Ulf Köther
- [R-sig-ME] Four available places on GLMM course in Banff
Highland Statistics Ltd
- [R-sig-ME] Nested random effect or unbalanced design?
Leppänen Ilkka
- [R-sig-ME] glmmADMB - User Guide
Ben Bolker
- [R-sig-ME] family() in probit-glmer
Alessandro Moscatelli
- [R-sig-ME] glmer takes long time even after restricting iterations
Prachi Sanghavi
- [R-sig-ME] Errors message from glmmADMB package: Zero Inflated, Negative Binomial for large panel dataset
Leo Yanes
- [R-sig-ME] lmer() with 'na.action=na.exclude'; error with summary()
John Maindonald
- [R-sig-ME] Influence of the random effects on fixed effect estimates in mixed models and interpretation of fixed effects in relation to random effects.
Tom Wilding
- [R-sig-ME] Using lmer on an augmented alpha square model
Morrison, Ginnie D.
- [R-sig-ME] Warning message in glmmADMB
Moshiur Rahman
- [R-sig-ME] Comparisons of models with and without a threshold
Christian Starzynski
- [R-sig-ME] GLMM for repeated measures in space and time series
Bárbara Baraibar Padró
- [R-sig-ME] Confidence intervals
Ben Bolker
- [R-sig-ME] Confidence interval for relative contribution of random effect variance
lorenz.gygax at agroscope.admin.ch
- [R-sig-ME] Question about linear mixed model
Douglas Bates
- [R-sig-ME] Multiple independent random effects
Mark Payne
- [R-sig-ME] link function with glmer and inverse.gaussian family
Helios de Rosario
- [R-sig-ME] Seeming discrepancy between summary and confint; was: Confidence interval for relative contribution of random effect variance
lorenz.gygax at agroscope.admin.ch
- [R-sig-ME] MCMCglmm multi-variate response for animal model
Shana Caro
- [R-sig-ME] SE and CI for ICC
Mohd Masood
- [R-sig-ME] Obscure convergence warning in optwrap() - convergence code 3 from bobyqa
Michael Cone
- [R-sig-ME] Problem with profile and glmer
Ken Beath
- [R-sig-ME] Is there a way to include both time correlation term and spatial correlation term in single lme model?
Nirmala Liyanage
- [R-sig-ME] Is there a way to include both time correlation term and spatial correlation term in a single lme model?
Nirmala Liyanage
- [R-sig-ME] informative prior for one variance
Van Dongen Stefan
- [R-sig-ME] distributions and correlations
Van Dongen Stefan
- [R-sig-ME] predict.merMod
Ben Bolker
- [R-sig-ME] glmer and model evaluation
Dusit Ngoprasert
- [R-sig-ME] xyplot() method for profile objects: error from use of the scales argument
John Maindonald
- [R-sig-ME] Course Lisbon: Introduction to Linear mixed effects models, GLMM and MCMC with R
Highland Statistics Ltd
- [R-sig-ME] Distribution of deviance residuals
Roelof Coster
- [R-sig-ME] Fwd: RE: [R] Help with lsmeans
Ben Bolker
- [R-sig-ME] Subject-wise gradient and Hessian
Vahid Nassiri
- [R-sig-ME] FW: methods for glmerMod object
Ben Bolker
- [R-sig-ME] sums of squares and F values in anova
Alexandra Kuznetsova
- [R-sig-ME] Confidence interval for sum of coefficients
Michael Cone
- [R-sig-ME] How can I estimate deviance explained of a mixed gamm?
Jon Lopez
- [R-sig-ME] individual Linear mixed models
Etn
- [R-sig-ME] Fwd: [Lme4-authors] LME4 and Lmer model
Zhanyou Xu
- [R-sig-ME] Course Halifax: Introduction to Linear mixed effects models, GLMM and MCMC with R
Highland Statistics Ltd
Last message date:
Tue Sep 30 18:39:55 CEST 2014
Archived on: Wed Oct 1 00:26:18 CEST 2014
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