July 2011 Archives by date

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Starting: Fri Jul 1 01:46:28 CEST 2011
Ending: Fri Jul 29 11:39:12 CEST 2011
Messages: 74

[Bioc-sig-seq] Adjusted p values in edgeR Davis McCarthy
[Bioc-sig-seq] R package for DGE analysis between multiple RNA-Seq samples Bruno Zeitouni
[Bioc-sig-seq] R package for DGE analysis between multiple RNA-Seq samples Krys Kelly
[Bioc-sig-seq] R package for DGE analysis between multiple RNA-Seq samples Gordon K Smyth
[Bioc-sig-seq] Welcome to the "Bioc-sig-sequencing" mailing list (Digest mode) 20907099
[Bioc-sig-seq] Running R and Bioconductor on a Computer Cluster in the Cloud - cloudnumbers.com Markus Schmidberger
[Bioc-sig-seq] Loading large BAM files Ivan Gregoretti
[Bioc-sig-seq] Loading large BAM files Kasper Daniel Hansen
[Bioc-sig-seq] Loading large BAM files Ivan Gregoretti
[Bioc-sig-seq] Loading large BAM files Martin Morgan
[Bioc-sig-seq] Loading large BAM files Martin Morgan
[Bioc-sig-seq] Loading large BAM files Ivan Gregoretti
[Bioc-sig-seq] Loading large BAM files Ivan Gregoretti
[Bioc-sig-seq] using GenomicFeatures Jason Lu
[Bioc-sig-seq] Supplying own variance functions and adjusted counts to a DESeq dataset Sean Ruddy
[Bioc-sig-seq] scanBam segfault Ivan Gregoretti
[Bioc-sig-seq] Loading large BAM files Martin Morgan
[Bioc-sig-seq] using GenomicFeatures Michael Lawrence
[Bioc-sig-seq] Supplying own variance functions and adjusted counts to a DESeq dataset Simon Anders
[Bioc-sig-seq] Supplying own variance functions and adjusted counts to a DESeq dataset Gordon K Smyth
[Bioc-sig-seq] scanBam segfault Martin Morgan
[Bioc-sig-seq] Supplying own variance functions and adjusted counts to a DESeq dataset Sean Ruddy
[Bioc-sig-seq] "pooled" dispersion estimation in edgeR Gordon K Smyth
[Bioc-sig-seq] Supplying own variance functions and adjusted counts to a DESeq dataset Simon Anders
[Bioc-sig-seq] scanBam segfault Martin Morgan
[Bioc-sig-seq] scanBam segfault Ivan Gregoretti
[Bioc-sig-seq] "pooled" dispersion estimation in edgeR Sean Ruddy
[Bioc-sig-seq] "pooled" dispersion estimation in edgeR Gordon K Smyth
[Bioc-sig-seq] "pooled" dispersion estimation in edgeR Sean Ruddy
[Bioc-sig-seq] scanBam memory issue Francesco Lescai
[Bioc-sig-seq] reduce in ShortRead Kunbin Qu
[Bioc-sig-seq] reduce in ShortRead Kasper Daniel Hansen
[Bioc-sig-seq] edgeR Warning Messages from maximizeInterpolant called from estimateGLMTagwiseDisp Sean Ruddy
[Bioc-sig-seq] psetdiff on GRangesLists Error Dario Strbenac
[Bioc-sig-seq] edgeR Warning Messages from maximizeInterpolant called from estimateGLMTagwiseDisp Gordon K Smyth
[Bioc-sig-seq] extract gene symbol error Kunbin Qu
[Bioc-sig-seq] extract gene symbol error Steve Lianoglou
[Bioc-sig-seq] minoverlap error in countOverlaps Kunbin Qu
[Bioc-sig-seq] edgeR Warning Messages from maximizeInterpolant called from estimateGLMTagwiseDisp Sean Ruddy
[Bioc-sig-seq] edgeR Warning Messages from maximizeInterpolant called from estimateGLMTagwiseDisp Kasper Daniel Hansen
[Bioc-sig-seq] using DEXSeq for RNA-seq data from Linux Jane Merlevede
[Bioc-sig-seq] minoverlap error in countOverlaps Steve Lianoglou
[Bioc-sig-seq] scanBam memory issue Steve Lianoglou
[Bioc-sig-seq] edgeR Warning Messages from maximizeInterpolant called from estimateGLMTagwiseDisp Sean Ruddy
[Bioc-sig-seq] scanBam memory issue Martin Morgan
[Bioc-sig-seq] count the coverage base by base Kunbin Qu
[Bioc-sig-seq] count the coverage base by base Michael Lawrence
[Bioc-sig-seq] count the coverage base by base Kunbin Qu
[Bioc-sig-seq] count the coverage base by base Michael Lawrence
[Bioc-sig-seq] count the coverage base by base Kunbin Qu
[Bioc-sig-seq] count the coverage base by base Michael Lawrence
[Bioc-sig-seq] count the coverage base by base Kunbin Qu
[Bioc-sig-seq] edgeR Warning Messages from maximizeInterpolant called from estimateGLMTagwiseDisp Gordon K Smyth
[Bioc-sig-seq] edgeR Warning Messages from maximizeInterpolant called from estimateGLMTagwiseDisp Gordon K Smyth
[Bioc-sig-seq] count the coverage base by base Kunbin Qu
[Bioc-sig-seq] count the coverage base by base Michael Lawrence
[Bioc-sig-seq] using DEXSeq for RNA-seq data from Linux Sean Davis
[Bioc-sig-seq] using DEXSeq for RNA-seq data from Linux Martin Morgan
[Bioc-sig-seq] differential binding Bogdan Tanasa
[Bioc-sig-seq] differential binding Mark Robinson
[Bioc-sig-seq] using DEXSeq for RNA-seq data from Linux Jane Merlevede
[Bioc-sig-seq] using DEXSeq for RNA-seq data from Linux Martin Morgan
[Bioc-sig-seq] using DEXSeq for RNA-seq data from Linux Martin Morgan
[Bioc-sig-seq] using DEXSeq for RNA-seq data from Linux Jane Merlevede
[Bioc-sig-seq] rtracklayer compilation error (make: *** [chain_io.o] Error 1) Ivan Gregoretti
[Bioc-sig-seq] rtracklayer compilation error (make: *** [chain_io.o] Error 1) Hervé Pagès
[Bioc-sig-seq] rtracklayer compilation error (make: *** [chain_io.o] Error 1) Ivan Gregoretti
[Bioc-sig-seq] rtracklayer compilation error (make: *** [chain_io.o] Error 1) Martin Morgan
[Bioc-sig-seq] rtracklayer compilation error (make: *** [chain_io.o] Error 1) Kasper Daniel Hansen
[Bioc-sig-seq] rtracklayer compilation error (make: *** [chain_io.o] Error 1) Hervé Pagès
[Bioc-sig-seq] DESeq Bogdan Tanasa
[Bioc-sig-seq] DESeq Nicolas Delhomme
[Bioc-sig-seq] problem when using DEXSeq on genes with 1 exon only Jane Merlevede
[Bioc-sig-seq] using DEXSeq for up and down regulated exons Jane Merlevede

Last message date: Fri Jul 29 11:39:12 CEST 2011
Archived on: Wed Aug 3 22:36:24 CEST 2011

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