[BioC] SRAdb error

Ayten YIGITER yigiter at hacettepe.edu.tr
Thu Mar 22 13:27:50 CET 2012


Hi, I am trying to get the SRAdb package work. I have successfully installed the SRAdb package and then I have got the following error: 
 
 
library(SRAdb)
sqlfile <- getSRAdbFile()
URL 'http://watson.nci.nih.gov/~zhujack/SRAmetadb.sqlite.gz' deneniyor
Content type 'application/octet-stream' length 187043912 bytes (178.4 Mb)
URL açıldı
downloaded 178.4 Mb
Unzipping... 
Error: sqliteNewConnection(drv, ...) : 
RS-DBI driver: (could not connect to dbname:
unable to open database file"

 
Could you help me at this point?

Sincerely yours
 
Dr. Ayten Yiğiter 
Hacettepe University 
Faculty of Science 
Department of Statistics  
Ankara/Turkey 
Phone: +90 312 2977900 


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