[ESS] [BUG]: unexpected error when evaluating commented code

[Rainer M Krug]

Hi

I have the attached file. If I open it, select the complete code and
evaluate it, I get an error:

> > > > > > > > > > > Error: unexpected ')' in ")"

But If I source the file, it works. If I add an additional line at the end
(e.g. cat()), the code evaluates fine.

Below please find the bug-report output from ess.

Cheers,

Rainer


[ess-site.el]: ess-customize-alist=nil
[ess-site.el _2_]: ess-customize-alist=nil
(S): ess-s-versions-create making M-x defuns for

(R): ess-r-versions-create making M-x defuns for
 R-2.8.1
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=
org-src-fontification:R-mode
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.

(R): ess-dialect=nil, buf=ASM.org, start-arg=nil
 current-prefix-arg=nil
(inferior-ess 0): ess-start-args=--no-readline --vanilla
ess-setq-vars-default 0: ess-language=Initial, -dialect=nil, buf=nil,
comint..echoes=nil, comint..sender=comint-simple-send
ess-setq-vars-default 1: ess-language=S, -dialect=R, buf=nil,
comint..echoes=nil, comint..sender=comint-simple-send
(inf-ess 1): lang=S, dialect=R, tmp-dialect=R, buf=ASM.org
(inf-ess 1.1): procname=R temp-dialect=R, buf-name=*R*
(inferior-ess) Method #3
start=/home/rkrug/Documents/Projects/AlienSpread/trunc/ buf=*R*
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(inf-ess 2.1): ess-language=S, ess-dialect=R buf=*R*
(inf-ess 2.2): start args = --no-readline --vanilla ,
inf-ess-start-args=--no-readline --vanilla
(inf-ess finish [S(R), R(nil,nil)]
(ess-multi 0):  inf-ess-start-args=--no-readline --vanilla ,
comint-..echoes=nil
(i-ess 1): buf=*R*, lang=S, comint..echo=nil,
comint..sender=comint-simple-send,
(i-ess 2): buf=*R*, lang=S, comint..echo=t,
comint..sender=inferior-R-input-sender,
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=t,
comint..sender=inferior-R-input-sender
(i-ess 3): curr-buf=*R*, comint..echo=t,
comint..sender=inferior-R-input-sender,
(ess-multi post inf-ess: start-args=--no-readline --vanilla ,
comint-echoes=t
(ess-multi 1):  start-args=--no-readline --vanilla
Making Process...Buf *R*, Proc R, Prog R
 Start File=nil, Args= --no-readline --vanilla .
(R): inferior-ess-language-start=options(STERM='iESS', editor='emacsclient')
resetting completion to 'ess-R-complete-object-name(ess-setq-vars-LOCAL):
language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=*Org Src ASM.org[ R ]*
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=example.R
(ess-mode-1.5): alist=((ess-local-customize-alist quote R-customize-alist)
(ess-dialect . R) (ess-suffix . R) (ess-dump-filename-template
ess-replace-regexp-in-string S$ ess-suffix ess-dump-filename-template-proto)
(ess-mode-syntax-table . R-syntax-table) (ess-mode-editing-alist .
R-editing-alist) (ess-change-sp-regexp . ess-R-change-sp-regexp)
(ess-help-sec-regex . ess-help-R-sec-regex) (ess-help-sec-keys-alist .
ess-help-R-sec-keys-alist) (ess-loop-timeout . ess-S-loop-timeout)
(ess-cmd-delay . ess-R-cmd-delay) (ess-function-pattern .
ess-R-function-pattern) (ess-object-name-db-file . ess-r-namedb.el)
(ess-imenu-mode-function quote ess-imenu-R) (inferior-ess-program .
inferior-R-program-name) (inferior-ess-objects-command .
inferior-R-objects-command) (inferior-ess-font-lock-keywords .
inferior-ess-R-font-lock-keywords) (inferior-ess-search-list-command .
search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-primary-prompt . \([A-Z][][A-Za-z0-9.]*\)?> )
(inferior-ess-secondary-prompt . + ?) (inferior-ess-start-file)
(inferior-ess-start-args . ) (ess-STERM . iESS) (ess-editor . R-editor)
(ess-pager . R-pager) (ess-language . S) (inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp-instead-of-fields . t))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline . t)
(comment-start . #) (comment-add . 1) (comment-start-skip . #+ *)
(comment-column . 40) (indent-line-function quote S-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-local-process-name) (ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (font-lock-defaults quote (ess-R-mode-font-lock-keywords nil nil
((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=nil,
comint..sender=comint-simple-send

Finished setting up ESS-mode.
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=*ESS-errors*,
comint..echoes=nil, comint..sender=comint-simple-send



Emacs  : GNU Emacs 23.2.1 (i686-pc-linux-gnu, GTK+ Version 2.24.4)
 of 2011-04-04 on rothera, modified by Debian
Package: ess-mode 5.14


current state:
==============
(setq
 ess-language "S"
 ess-dialect "R"
 ess-ask-for-ess-directory "TRUE"
 ess-ask-about-transfile nil
 ess-directory nil
 ess-keep-dump-files "always"
 ess-source-directory "/tmp/"
 )

-- 
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology,
UCT), Dipl. Phys. (Germany)

Centre of Excellence for Invasion Biology
Stellenbosch University
South Africa

Tel :       +33 - (0)9 53 10 27 44
Cell:       +33 - (0)6 85 62 59 98
Fax (F):       +33 - (0)9 58 10 27 44

Fax (D):    +49 - (0)3 21 21 25 22 44

email:      Rainer at krugs.de

Skype:      RMkrug