[BioC] how to get pig genome and for miRNA target scan
wang peter
wng.peter at gmail.com
Wed Mar 14 19:34:09 CET 2012
dear all:
i have some miRNA sequences like this:
AAAUCUCUGCAGGCAAAUGUGA
AACAUUCAACCUGUCGGUGAGU
AACAUUCAACCUGUCGGUGAGUU
AACAUUCAACCUGUCGGUGAGUUU
AACCACACAACCUACUACCUCA
first, i want to download pig genome(it should include 3'UTR)
second, i want to use some R packge to do miRNA target scan
who have some pipeline or coding
please help me
thank you in advances
--
shan gao
Room 231(Dr.Fei lab)
Boyce Thompson Institute
Cornell University
Tower Road, Ithaca, NY 14853-1801
Office phone: 1-607-254-1267(day)
Official email:sg839 at cornell.edu
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