[BioC] unable to readImage using EBImage package

Dan Tenenbaum dtenenba at fhcrc.org
Wed Mar 7 02:42:47 CET 2012


On Tue, Mar 6, 2012 at 4:35 PM, Nurdiyanah Jambari <yanadj28 at gmail.com> wrote:
> Sorry, I forgot to mention that the system will go to not responding and
> need to be closed after the pop-up message appear.
>

Please post the output of sessionInfo(), run it immediately before the
command that causes the error.

Thanks,
Dan

>
>
>
> On Wed, Mar 7, 2012 at 8:30 AM, Dan Tenenbaum <dtenenba at fhcrc.org> wrote:
>>
>> On Tue, Mar 6, 2012 at 4:26 PM, Nurdiyanah Jambari <yanadj28 at gmail.com>
>> wrote:
>> > This error happen while I'm trying to view the example image. These is
>> > because I read from the manual, if I want to make sure that the package
>> > is
>> > install correctly, it should be able to display the "lena.gif" image:
>> >
>> >
>> >>library("EBImage")
>> >>f = system.file("images", "lena.gif", package="EBImage")
>> >>lena = readImage(f)
>> >>display(lena)
>> >
>> >
>> >
>> Please post the output of
>> sessionInfo()
>> Thanks
>> Dan
>>
>>
>> >
>> > On Wed, Mar 7, 2012 at 3:14 AM, Dan Tenenbaum <dtenenba at fhcrc.org>
>> > wrote:
>> >>
>> >> On Tue, Mar 6, 2012 at 12:39 AM, Nurdiyanah Jambari
>> >> <yanadj28 at gmail.com>
>> >> wrote:
>> >> > Hi,
>> >> >
>> >> > Please help me with these problem. Every time I'm trying to display
>> >> > the
>> >> > example image, I receive these kind of pop-up warning:
>> >> >
>> >> >
>> >> > ** (<unknown>:2932): WARNING **: No builtin or dynamically loaded
>> >> > modules
>> >> > were found. Pango will not work correctly. This probably means
>> >> > there was an error in the creation of:
>> >> >   'C:\Windows\system32\etc\pango\pango.modules'
>> >> > You may be able to recreate this file by running pango-querymodules.
>> >> >
>> >> > (<unknown>:2932): GLib-GObject-CRITICAL **: file gobject.c: line 1561
>> >> > (g_object_
>> >> > ref): assertion `G_IS_OBJECT (object)' failed
>> >> >
>> >> > ** (<unknown>:2932): CRITICAL **: file pango-engine.c: line 68
>> >> > (_pango_engine_sh
>> >> > ape_shape): assertion `PANGO_IS_FONT (font)' failed
>> >> >
>> >> >
>> >> > I have try several method that I found searching from the internet,
>> >> > but
>> >> > still I could not fix these problem.
>> >>
>> >> It's difficult for us to help without knowing the exact commands you
>> >> tried that caused this error, and more information about your system
>> >> (e.g., the output of the sessionInfo() function).
>> >>
>> >> Dan
>> >>
>> >>
>> >> >
>> >> >
>> >> > Nurdiyanah Bt Hj Jambari
>> >> > Student
>> >> > Faculty of Engineering
>> >> > Bachelor Engineering of Computer & Communication System Engineering
>> >> > University Putra Malaysia
>> >
>> >
>> >
>> >
>> > --
>> > Nurdiyanah Bt Hj Jambari
>> > Student
>> > Faculty of Engineering
>> > Bachelor Engineering of Computer & Communication System Engineering
>> > University Putra Malaysia
>
>
>
>
> --
> Nurdiyanah Bt Hj Jambari
> Student
> Faculty of Engineering
> Bachelor Engineering of Computer & Communication System Engineering
> University Putra Malaysia



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