[BioC] mzR error

[Gavin Blackburn]

Hi Laurent,

Thanks very much, I'll check the Rcpp list to see when it is solved and will downgrade it for now.

Cheers,

Gavin.

-----Original Message-----
From: Laurent Gatto [mailto:laurent.gatto at gmail.com] 
Sent: 26 June 2012 17:38
To: Gavin Blackburn [guest]
Cc: bioconductor at r-project.org; Gavin Blackburn
Subject: Re: [BioC] mzR error

On 26 June 2012 17:19, Laurent Gatto <laurent.gatto at gmail.com> wrote:
> Dear Gavin,
>
> I can't reproduce this, but I do not have the same configuration at 
> hand for the moment - this could be an incompatibility with the latest 
> Rcpp.

Ok, I can now reproduce on a Windows box with mzR 1.2.1 (latest
stable) and Rcpp 0.9.12. Downgrading to Rcpp 0.9.10 [1] fixes the issue. I will bring it up on the Rcpp list.

Thank you for the report.

Laurent

[1] http://cran.us.r-project.org/bin/windows/contrib/2.13/Rcpp_0.9.10.zip


> What version of mzR have you - packageVersion("mzR")
>
> Best wishes,
>
> Laurent
>
> On 26 June 2012 16:07, Gavin Blackburn [guest] <guest at bioconductor.org> wrote:
>>
>> We are getting the following error when trying to install and run mzR on a 64-bit Windows 7 machine:
>>> library(mzR)
>> Loading required package: Rcpp
>> Error : .onLoad failed in loadNamespace() for 'mzR', details:
>>  call: value[[3L]](cond)
>>  error: failed to load module Ramp from package mzR could not find 
>> function "errorOccured"
>> Error: package/namespace load failed for ‘mzR’
>>
>>
>> Do you know what might be causing it?
>>
>> Cheers,
>>
>> Gavin.
>>
>>
>>  -- output of sessionInfo():
>>
>>  sessionInfo()
>> R version 2.15.1 (2012-06-22)
>> Platform: x86_64-pc-mingw32/x64 (64-bit)
>>
>> locale:
>> [1] LC_COLLATE=English_United Kingdom.1252 [2] 
>> LC_CTYPE=English_United Kingdom.1252 [3] LC_MONETARY=English_United 
>> Kingdom.1252 [4] LC_NUMERIC=C [5] LC_TIME=English_United Kingdom.1252
>>
>> attached base packages:
>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>
>> other attached packages:
>> [1] Rcpp_0.9.12         BiocInstaller_1.4.7
>>
>> loaded via a namespace (and not attached):
>> [1] Biobase_2.16.0     BiocGenerics_0.2.0 tools_2.15.1
>>
>> --
>> Sent via the guest posting facility at bioconductor.org.
>>
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>
>
>
> --
> [ Laurent Gatto | slashhome.be ]



--
[ Laurent Gatto | slashhome.be ]