[Bioc-sig-seq] Issue RSQLite

[Steve Lianoglou]

Hi,

On Mon, Jan 24, 2011 at 7:41 PM, Luke Zappia <zappia at wehi.edu.au> wrote:
> Having problems accessing a TranscriptDb object. Consistently getting the following error:
>
> Error in sqliteFetch(rs, n = -1, ...) :
>  RSQLite driver: (RS_SQLite_fetch: failed first step: disk I/O error)
>
> Are there any suggested solutions?
>

Hmm ... can you read the database with "sqlite3" from the command line
(outside of R, I mean)?

-steve

-- 
Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact