[Bioc-sig-seq] ReadFastq error

Seth Falcon sfalcon at fhcrc.org
Fri Feb 19 18:04:40 CET 2010


On 2/19/10 1:30 AM, Ramzi TEMANNI wrote:
> Hi Martin,
> Is there a debug mode so  I can display the line causing the problem ?

You might try setting the error option in R:

     options(error=recover)

Then (hopefully) you will be able to inspect the state a bit when the 
error occurs.

+ seth

-- 
Seth Falcon
Bioconductor Core Team | FHCRC



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