[Bioc-sig-seq] Rsamtools problem

[Droit Arnaud]

Dear all,

I have read about Rsamtools being in dev repositories and I would like to try it.
My working environment is Snow Leopard 64 bit and R version 2.11 (see the SessionInfo at the end). When I try to install it, I have the following error message :

Attaching package: 'IRanges'
 The following object(s) are masked from package:base :

     Map,
     cbind,
     mapply,
     order,
     pmax,
     pmax.int,
     pmin,
     pmin.int,
     rbind,
     rep.int,
     table

Error in importIntoEnv(impenv, impnames, ns, impvars) :
  objects ''.__C__file', '.__C__connection'' are not exported by 'namespace:Biostrings'
ERROR: lazy loading failed for package 'Rsamtools'

 *   removing '/Library/Frameworks/R.framework/Resources/library/Rsamtools'

Does anyone have some idea about this problem ?

Thanks

Arnaud.

> sessionInfo()
R version 2.11.0 Under development (unstable) (2009-10-20 r50178) i386-apple-darwin10.0.0

locale:
[1] en_CA.UTF-8/en_CA.UTF-8/C/C/en_CA.UTF-8/en_CA.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

other attached packages:
[1] ShortRead_1.3.41   lattice_0.17-26    BSgenome_1.15.4    Biostrings_2.15.21
[5] IRanges_1.5.46

loaded via a namespace (and not attached):
[1] Biobase_2.5.8 grid_2.11.0   hwriter_1.1