[R-sig-Geo] "package 'stringr' does not have a name space"

Nick Matzke matzke at berkeley.edu
Tue Oct 25 22:09:51 CEST 2011


Hi all,

I have almost gotten rgeos to install, however I'm getting a 
peculiar error about a (successfully installed) other 
package, stringr:

"Error : package 'stringr' does not have a name space"

I have asked the r-sig-geo list, but this error looks like a 
more generic one, perhaps there is some simple command I 
could add to stringr to get the namespace correct?

Any ideas much appreciated!

Cheers,
Nick


PS Full error message below...yes, I'm still on Intel Mac OS 
X 10.4 and thus R 2.10.1, can't be helped at the moment...

=========================================
 > sessionInfo()
R version 2.10.1 (2009-12-14)
i386-apple-darwin8.11.1

locale:
[1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     grDevices utils     datasets  graphics 
methods   base

other attached packages:
[1] stringr_0.2 plyr_0.1.9

loaded via a namespace (and not attached):
[1] tools_2.10.1


> install.packages("/Users/nick/Desktop/downloads/rgeos",
"/Library/Frameworks/R.framework/Resources/library/", NULL, 
type='source',
+ 
configure.args="--with-geos-config=/usr/local/bin/geos-config")
WARNING: ignoring environment value of R_HOME
Loading ~/.Rprofile...
Currently viewed PATH:
/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/usr/texbin:/Applications/dssp:/Library/Frameworks/PROJ.framework/:/Library/Frameworks/PROJ.framework/Programs:/Library/Frameworks/PROJ.framework/Versions/4.6/Headers:/Library/Frameworks/GDAL.framework/Versions/1.6/Programs:/usr/texbin:/Applications/dssp:/Library/Frameworks/PROJ.framework/:/Library/Frameworks/PROJ.framework/Programs:/Library/Frameworks/PROJ.framework/Versions/4.6/Headers:/Library/Frameworks/GDAL.framework/Versions/1.6/Programs
* installing *source* package ‘rgeos’ ...
geos-config: /usr/local/bin/geos-config
GEOS: 3.2.3
CPPFLAGS: -DHAVEUNARYUNION -I/usr/local/include
LIBS: -L/usr/local/lib -lgeos
configure: creating ./config.status
config.status: creating src/Makevars
** libs
** arch - i386
make: Nothing to be done for `all'.
** R
** inst
** preparing package for lazy loading
Loading required package: plyr
Error : package 'stringr' does not have a name space
ERROR: lazy loading failed for package ‘rgeos’
* removing 
‘/Library/Frameworks/R.framework/Versions/2.10/Resources/library/rgeos’
Warning message:
In install.packages("/Users/nick/Desktop/downloads/rgeos", 
"/Library/Frameworks/R.framework/Resources/library/",  :
   installation of package 
'/Users/nick/Desktop/downloads/rgeos' had non-zero exit status



-- 
====================================================
Nicholas J. Matzke
Ph.D. Candidate, Graduate Student Researcher

Huelsenbeck Lab
Center for Theoretical Evolutionary Genomics
4151 VLSB (Valley Life Sciences Building)
Department of Integrative Biology
University of California, Berkeley

Graduate Student Instructor, IB200B
Principles of Phylogenetics: Ecology and Evolution
http://ib.berkeley.edu/courses/ib200b/
http://phylo.wikidot.com/


Lab websites:
http://ib.berkeley.edu/people/lab_detail.php?lab=54
http://fisher.berkeley.edu/cteg/hlab.html
Dept. personal page: 
http://ib.berkeley.edu/people/students/person_detail.php?person=370
Lab personal page: 
http://fisher.berkeley.edu/cteg/members/matzke.html
Lab phone: 510-643-6299
Dept. fax: 510-643-6264

Cell phone: 510-301-0179
Email: matzke at berkeley.edu

Mailing address:
Department of Integrative Biology
3060 VLSB #3140
Berkeley, CA 94720-3140

-----------------------------------------------------
"[W]hen people thought the earth was flat, they were wrong. 
When people thought the earth was spherical, they were 
wrong. But if you think that thinking the earth is spherical 
is just as wrong as thinking the earth is flat, then your 
view is wronger than both of them put together."

Isaac Asimov (1989). "The Relativity of Wrong." The 
Skeptical Inquirer, 14(1), 35-44. Fall 1989.
http://chem.tufts.edu/AnswersInScience/RelativityofWrong.htm



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