[R] MANOVA summary.manova(m) :" residuals have rank"
Ozgul Inceoglu
Ozgul.Inceoglu at ulb.ac.be
Fri May 3 14:59:04 CEST 2013
Dear All, I am trying to perform MANOVA. I have table with 504 columns(species) and 36 rows) with two grouping (season and location)
Zx <- Z[c(4:504)]
Zxm <- as.matrix(Z)
m<- manova(Zxm~Season*location, data=Z)
when I do summary.aov, I get respond for each species but summary.manova
summary.manova(m) :" residuals have rank" 24<501.
What can it be the reason for this error message?
Thank you,
Ozgul
Below you can see part of the table.
name Season location Acetobacter Aerococcus Alishewanella Amaricoccus
xls-nord-01 J w 0 0,024078979 0 0
bxls-sud-01 J w 0 0 0 0
brux-nord-04 A w 0 0 0 0
brux-sud-04 A w 0 0 0 0
br-nord-07 Ju w 0 0 0 0
br-sud-07 Ju w 0 0 0 0
b-nord-10 O w 0 0 0 0
bsud-10 O w 0,107836089 0 0,107836089 0,035945363
Z1-01 J u 0 0 0 0,040567951
Z3-01 J u 0 0 0 0
Z5-01 J d 0,023116043 0 0 0
Z7-01 J d 0,014130281 0 0 0
Z9-01 J d 0 0 0 0
Z10-01 J d 0 0 0 0
Z12-01 J d 0 0 0 0
Z1-04 A u 0 0 0 0
Z3-04 A u 0 0 0 0
Z5-04 A d 0 0 0 0
Z7-04 A d 0 0 0 0
Z9-04 A d 0 0,013839873 0 0
Z10-04 A d 0 0 0 0
Z12-04 A d 0 0 0 0
Z1-07 Ju u 0 0 0 0
Z3-07 Ju u 0 0 0 0
Z5-07 Ju d 0 0 0 0
Z7-07 Ju d 0 0 0 0
Z9-07 Ju d 0 0 0 0
Z10-07 Ju d 0 0 0 0
Z12-07 Ju d 0 0,022301517 0 0
Z1-10 O u 0 0 0 0
Z3-10 O u 0 0 0 0
Z5-10 O d 0 0 0 0
Z7-10 O d 0 0 0,052924054 0
Z9-10 O d 0 0 0,035050824 0
Z10-10 O d 0 0 0 0,040783034
Z12-10 O d 0 0 0 0
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