[Rd] R-forge, package dependencies
Martin Maechler
maechler at stat.math.ethz.ch
Wed Jan 16 09:31:41 CET 2013
>>>>> Nick Sabbe <nick.sabbe at ugent.be>
>>>>> on Tue, 15 Jan 2013 21:34:52 +0100 writes:
> I have exactly the same issue with a pair of my packages
> on R-Forge. I've already notified Stefan, but I mentioned
> it wasn't urgent for me :)
> It must have something to do with the R check using a
> different environment than the build...
notably when using '--as-cran' I think;
this looks like a pretty infelicitous decision to me:
E.g. I can no longer use --as-cran for checking our copula
package (on my own computer), as that suggests Rmpfr and gmp and
these depend on the corresponding external C libraries (mpfr & gmp)
and these rely on LD_LIBRARY_PATH and that now fails to be
looked at in such circumstances.
To me this somewhat recent change looks like something that
should be re-considered on the R side..
Martin
> So good hunting, Stefan!
indeed...
> Nick Sabbe
> --
> ping: nick.sabbe at ugent.be link: http://biomath.ugent.be
> wink: A1.056, Coupure Links 653, 9000 Gent ring:
> 09/264.59.36
> -- Do Not Disapprove
> -----Original Message----- From:
> r-devel-bounces at r-project.org
> [mailto:r-devel-bounces at r-project.org] On Behalf Of Uwe
> Ligges Sent: dinsdag 15 januari 2013 21:09 To: Thomas
> Lumley Cc: Stefan Theussl; R-devel Subject: Re: [Rd]
> R-forge, package dependencies
> On 15.01.2013 20:47, Thomas Lumley wrote:
>> I have a project on R-forge
>> (sqlsurvey.r-forge.r-project.org) with two packages,
>> RMonetDB and sqlsurvey.
>>
>> At the moment, sqlsurvey is listed as failing to build.
>> The error is on the Linux package check, which says that
>> RMonetDB is not available:
>>
>>
>> * checking package dependencies ... ERROR Package
>> required but not available: 'RMonetDB'
>>
>> RMonetDB has built successfully: r-forge lists its status
>> as 'current', with Linux, Windows, and Mac packages
>> available for download. The package check for sqlsurvey
>> on Windows and Mac finds RMonetDB without any problems,
>> it's just on Linux that it appears to be
> unavailable.
>>
>> Any suggestions for how to fix this? I've tried uploading
>> a new version of RMonetDB, but the situation didn't
>> change: it built successfully, but the Linux check of
>> sqlsurvey still couldn't find it.
> I think you have to ask Stefan to check the details.
> Best, Uwe
>> -thomas
>>
>>
>>
>>
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