[ESS] toggle between R versions
Mark W Kimpel
mwkimpel at gmail.com
Wed Feb 6 18:24:53 CET 2008
Success. Thanks for all the help. mark
Mark W. Kimpel MD ** Neuroinformatics ** Dept. of Psychiatry
Indiana University School of Medicine
15032 Hunter Court, Westfield, IN 46074
(317) 490-5129 Work, & Mobile & VoiceMail
(317) 204-4202 Home (no voice mail please)
mwkimpel<at>gmail<dot>com
******************************************************************
Martin Maechler wrote:
>>>>>> "MWK" == Mark W Kimpel <mwkimpel at gmail.com>
>>>>>> on Wed, 06 Feb 2008 11:43:03 -0500 writes:
>
> MWK> Alright, I must be awfully close. Here is my insert into my .emacs
> MWK> (setq exec-path (cons
> MWK> (expand-file-name "~/R_HOME/R-devel/R-build/bin")
> MWK> (cons
> MWK> (expand-file-name "~/R_HOME/R-current/R-build/bin")
> MWK> exec-path)))
>
> MWK> Whichever ver of R I put inside the first expand-file-name is the one
> MWK> that is executed when I hit the "R" icon or "R" under "start process".
> MWK> With "start process > other > R-newest" nothing loads with either try.
>
> The question is what exactly is inside
> ~/R_HOME/R-devel/R-build/bin/
> and ~/R_HOME/R-current/R-build/bin/
>
> I guess each has an 'R' (sh script) file in there
>
> However the ESS code expects to find executables
> *called*
>
> R
> R-2.5.1
> R-2.6.1
> R-2.6.2
> R-devel
> R-patched
> R-devel-foo
>
> In my setup I use symbolic links to create all of these,
> inside typically /usr/local/bin/
>
> Martin
>
> MWK> Is there something wrong with my Lisp code?
> MWK> Mark
>
>
>
> MWK> Mark W. Kimpel MD ** Neuroinformatics ** Dept. of Psychiatry
> MWK> Indiana University School of Medicine
>
> MWK> 15032 Hunter Court, Westfield, IN 46074
>
> MWK> (317) 490-5129 Work, & Mobile & VoiceMail
> MWK> (317) 204-4202 Home (no voice mail please)
>
> MWK> mwkimpel<at>gmail<dot>com
>
> MWK> ******************************************************************
>
>
> MWK> Martin Maechler wrote:
> >>>>>>> "MWK" == Mark W Kimpel <mwkimpel at gmail.com>
> >>>>>>> on Wed, 06 Feb 2008 11:16:18 -0500 writes:
> >>
> MWK> I"m trying to do it Martin's way because I like to keep my
> MWK> site-libraries separate from the R folders for ease of upgrade purposes.
> MWK> I know have both R-2.6.1 and R-devel on my PATH. From the shell, typing
> MWK> "R" gets me 2.6.1 because its first on my PATH; but from ESS now I can't
> MWK> get either R to start.
> >>
> MWK> How can I customize emacs exec-path? From what I have read, it is
> MWK> initialized from the PATH variable.
> >>
> >> Exactly. That's why I tried to say that they are typically equivalent
> >> (but not in the case where your own emacs-initialization code
> >> modifies exec-path).
> >>
> >> Martin
> >>
> MWK> Mark
> >>
> MWK> Mark W. Kimpel MD ** Neuroinformatics ** Dept. of Psychiatry
> MWK> Indiana University School of Medicine
> >>
> MWK> 15032 Hunter Court, Westfield, IN 46074
> >>
> MWK> (317) 490-5129 Work, & Mobile & VoiceMail
> MWK> (317) 204-4202 Home (no voice mail please)
> >>
> MWK> mwkimpel<at>gmail<dot>com
> >>
> MWK> ******************************************************************
> >>
> >>
> MWK> Martin Maechler wrote:
> >> >>>>>>> "RMH" == Richard M Heiberger <rmh at temple.edu>
> >> >>>>>>> on Tue, 5 Feb 2008 23:57:18 -0500 writes:
> >> >>
> RMH> That is supposed to work on Linux with no further
> RMH> intervention from the user. Please reply to the list
> RMH> with which versions of OS, emacs, ESS you are using.
> RMH> Are you doing anything strange in your site-start.el or
> RMH> .emacs file? Where are the R files living? Are they
> RMH> in the default place for Linux distributions? I am
> RMH> very puzzled that Other/ doesn't contain at least three
> RMH> items: R-newest, R-2.6.1, R-devel. They are usually
> RMH> placed on that menu automatically when ess-site is
> RMH> started.
> >> >>
> RMH> Try manually entering
> RMH> M-x R-devel
> RMH> and let the list know if that was able to start the alternate version.
> >> >>
> >> >> For all this to work, these versions of R must be in Mark's
> >> >> PATH when emacs is started, or, actually rather in
> >> >> Emacs' exec-path variable at the time the ESS lisp code is
> >> >> loaded.
> >> >>
> >> >>
> >> >>
> >> >>
> RMH> -----Original Message-----
> RMH> From: Mark W Kimpel [mailto:mwkimpel at gmail.com]
> RMH> Sent: Tuesday, February 05, 2008 11:40 PM
> RMH> To: Richard M. Heiberger
> RMH> Cc: ess-help at stat.math.ethz.ch
> RMH> Subject: Re: [ESS] toggle between R versions
> >> >>
> RMH> Richard,
> >> >>
> RMH> This was the first thing I tried, but the only thing listed under
> RMH> "other" is "R-newest", which when I tried it, loaded R-2.6.1 just as "R"
> RMH> does. I am not using Windows, which may keep track of versions in the
> RMH> registry, but Linux, where I have to put a symbolic link to R in /usr/bin
> >> >>
> RMH> mark
> >> >>
> RMH> Mark W. Kimpel MD ** Neuroinformatics ** Dept. of Psychiatry
> RMH> Indiana University School of Medicine
> >> >>
> RMH> 15032 Hunter Court, Westfield, IN 46074
> >> >>
> RMH> (317) 490-5129 Work, & Mobile & VoiceMail
> RMH> (317) 204-4202 Home (no voice mail please)
> >> >>
> RMH> mwkimpel<at>gmail<dot>com
> >> >>
> RMH> ******************************************************************
> >> >>
> >> >>
> RMH> Richard M. Heiberger wrote:
> >> >> >> When you are in a myfile.r buffer, click on the emacs menu item
> >> >> >> ESS/Start Process/Other/
> >> >> >> This will give you a list of all versions of R on your computer.
> >> >> >> Click one of them and it will execute inside an *R* buffer.
> >> >> >>
> >> >> >> -----Original Message-----
> >> >> >> Behalf Of Mark W Kimpel
> >> >> >> Sent: Tuesday, February 05, 2008 11:11 PM
> >> >> >> Subject: [ESS] toggle between R versions
> >> >> >>
> >> >> >> I have both R-2.6.1 and R-devel installed on Ubuntu Gutsy, each with
> >> >> >> their own site-library, although currently I go into .Rprofile to
> >> >> >> manually change with site-library will be loaded. When starting R from
> >> >> >> within ESS-Emacs, I would like to be able to instruct which version I
> >> >> >> want to use. Is this possible?
> >> >>
> >> >> yes. That's what Rich has been trying to help you with above
> >> >>
> >> >> >> For this to work, I would also need
> >> >> >> .Rprofile to detect the version of R and use the appropriate site-library.
> >> >>
> >> >> that's the R part - maybe even more easy for you.. :
> >> >> I do similar things.
> >> >> If all the R versions you use are good enough to have getRversion(),
> >> >> then use that.
> >> >> The help ?getRversion contains this as part of its
> >> >> examples :
> >> >>
> >> >> if(getRversion() <= "2.5.0") { ## work around missing feature
> >> >> cat("Your version of R, ", as.character(getRversion()),
> >> >> ", is outdated.\n",
> >> >> "Now trying to work around that ...\n", sep = "")
> >> >> }
> >> >>
> >> >> otherwise {for *old* versions of R}, you need
> >> >> RVersion <- paste(R.version$major, R.version$minor, sep=".")
> >> >>
> >> >> *and* then must be more careful with the if(.) but
> >> >> if(RVersion == "2.6.1")
> >> >> will also work and most '<=' or '>=' will work correctly as well
> >> >>
> >> >> >>
> >> >> >> Can all or any of this be done?
> >> >>
> >> >> yes indeed
> >> >>
> >>
>
> MWK> ______________________________________________
> MWK> ESS-help at stat.math.ethz.ch mailing list
> MWK> https://stat.ethz.ch/mailman/listinfo/ess-help
>
More information about the ESS-help
mailing list