[BioC] A basic question about retrieve the absolute genome position from the output of of function matchPWM .

[Holly]

Hi, Steve,
I should pay attention to the arrows near the gene RHOA, e.g. chr3:49,396,579-49,449,428.
Yes, left and right are relatively.

"people often/occasionally/might-be-inclined-to include
sequence up to and including the first intron of a gene when looking
for regulatory motifs" - If you have citation for this, will be even more helpful.

Thanks again,
Holly