[BioC] Regarding CDF & annotation package
Hooiveld, Guido
Guido.Hooiveld at wur.nl
Mon Oct 22 09:11:53 CEST 2012
Hi,
You can find annotation packages for both array types at the annotation page of BioC:
http://www.bioconductor.org/packages/release/BiocViews.html#___AnnotationData
Look for "hgu133a.db" (Affymetrix Human Genome U133 Set annotation data (chip hgu133a)) and "nugohs1a520180.db" (Affymetrix nugohs1a520180 annotation data (chip nugohs1a520180)).
Regards,
Guido
---------------------------------------------------------
Guido Hooiveld, PhD
Nutrition, Metabolism & Genomics Group
Division of Human Nutrition
Wageningen University
Biotechnion, Bomenweg 2
NL-6703 HD Wageningen
the Netherlands
tel: (+)31 317 485788
fax: (+)31 317 483342
email: guido.hooiveld at wur.nl
internet: http://nutrigene.4t.com
http://scholar.google.com/citations?user=qFHaMnoAAAAJ
http://www.researcherid.com/rid/F-4912-2010
-----Original Message-----
From: bioconductor-bounces at r-project.org [mailto:bioconductor-bounces at r-project.org] On Behalf Of Gnanakkumaar P
Sent: Saturday, October 20, 2012 08:26
To: bioconductor at stat.math.ethz.ch
Subject: [BioC] Regarding CDF & annotation package
Dear Sir/Madam,
I am using affylmgui package for microarray data analysis
I am using following two chip set data. I am very thankful if you could help with annotation package.
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
GPL7020_NuGO_Hs1a520180
Thank you very much..
--
With Regards,
P.Gnanakkumaar
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