[BioC] RCurl problem
Ina Hoeschele
inah at vbi.vt.edu
Tue Apr 24 21:19:20 CEST 2012
Hi all,
sorry for this silly problem. I'm trying to install biomaRt on a new PC and there seems to be a problem with the required RCurl, please see below. Can someone give me a hint?
Thanks, Ina
* installing *source* package ‘RCurl’ ...
** package ‘RCurl’ successfully unpacked and MD5 sums checked
checking for curl-config... no
Cannot find curl-config
ERROR: configuration failed for package ‘RCurl’
* removing ‘/home/inah/R/x86_64-pc-linux-gnu-library/2.15/RCurl’
The downloaded source packages are in
‘/tmp/RtmpWLdm34/downloaded_packages’
Warning message:
In install.packages("RCurl") :
installation of package ‘RCurl’ had non-zero exit status
> sessionInfo()
R version 2.15.0 (2012-03-30)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=C LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] grid stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] canine2.db_2.7.1 org.Cf.eg.db_2.7.1 RSQLite_0.11.1
[4] DBI_0.2-5 annotate_1.34.0 AnnotationDbi_1.18.0
[7] made4_1.30.0 scatterplot3d_0.3-33 gplots_2.10.1
[10] KernSmooth_2.23-7 caTools_1.12 bitops_1.0-4.1
[13] gdata_2.8.2 gtools_2.6.2 RColorBrewer_1.0-5
[16] ade4_1.5-0 affy_1.34.0 Biobase_2.16.0
[19] BiocGenerics_0.2.0 BiocInstaller_1.4.3 limma_3.12.0
loaded via a namespace (and not attached):
[1] affyio_1.24.0 IRanges_1.14.2 preprocessCore_1.18.0
[4] stats4_2.15.0 tcltk_2.15.0 tools_2.15.0
[7] xtable_1.7-0 zlibbioc_1.2.0
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