[BioC] edgeR reading data

[Gordon K Smyth]

Dear Li,

It seems to me that there are four case studies in the edgeR User's Guide 
that give fully worked examples of reading data into R and into edgeR. 
Perhaps you might explain where you're trying to import the data from, 
i.e., what format the data are in now.

In his reply, Alessandro Guffanti has explained a good way to read data 
in, and there are others.

Best wishes
Gordon

> Date: Wed, 11 Apr 2012 13:42:18 -0500
> From: "Wang, Li" <li.wang at ttu.edu>
> To: "bioconductor at r-project.org" <bioconductor at r-project.org>
> Subject: [BioC] edgeR reading data
>
> Dear List
>
> I am a very starter in edgeR analyses. When reading through the User 
> Guide and homepage of edgeR, I did not find any examples of the 
> importing data. My RNA-seq data can be divided into two groups, which 
> then could be divided into two subgroups. And each subgroup has 8 
> replicates. I am writing to ask if someone can give me a small example 
> of the data that could be red in edgeR.
>
> I would appreciate your help a lot!
>
> Thanks
> Li

______________________________________________________________________
The information in this email is confidential and intend...{{dropped:4}}