[BioC] Hypergraph representation of reactions
Robert Gentleman
rgentlem at fhcrc.org
Mon Oct 5 20:01:06 CEST 2009
Hi Anand,
Anand Gavai wrote:
> Dear Community,
>
> We are working on reaction networks representing metabolites and reactions,
> to display such a network we use bipartite graphs representing metabolites
> and reactions. However to visualize and understand them is a bit difficult
> from a biologist perspective.
>
> So was wondering if there is some effort going in this regard on the
> implementation of a hypergraph as shown in "C" of the attached file. There
> was an initiative few years back on the "hypergraph" package, but I guess
> the development has stopped!!.
slowed down.
Did you try to render those graphs? I did not see anything that could
not be done with Rgraphviz, pretty much as it is now.
best wishes
Robert
>
> Any information in this regard will be of great help.
>
>
>
> Thanks and Regards,
>
>
>
> Anand
>
>
>
>
>
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