[Bioc-sig-seq] BSGenome: Intermittent failure in getSeq, matchPattern and findOverlaps

[Seth Falcon]

Hi Aaron,

On 3/8/10 10:02 AM, Seth Falcon wrote:
> On 3/8/10 1:30 AM, Aaron Statham wrote:
>> For the last few days I've been coming across a show-stopping bug when
>> performing sequence analysis using BSgenome - my code fails either in
>> getSeq, matchPattern or findOverlaps in a completely intermittent way,
>> with the only consistent error message being inside either a get() or
>> assign() call:
>>
>> "formal argument "envir" matched by multiple actual arguments"

I believe this is now fixed in R-devel.

+ seth