[Bioc-sig-seq] Parallel version of the Biostrings::read.DNAStringSet and write.XStringSet functions ?

Sirisha Sunkara SSunkara at lbl.gov
Tue Mar 2 21:00:18 CET 2010


Hello,

A newbie question: is there a parallel version available to work on large fasta files, for these functions already?

Thank You,

--sirisha

> sessionInfo()                                                                                                                      
R version 2.10.1 (2009-12-14) 
x86_64-unknown-linux-gnu 
 
locale:
[1] C
 
attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     
 
other attached packages:
[1] Biostrings_2.14.12 IRanges_1.4.11    
 
loaded via a namespace (and not attached):
[1] Biobase_2.6.1



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