[Bioc-sig-seq] Alignment to only 1 direction DNA strand

[Lana Schaffer]

________________________________________
From: Lana Schaffer
Sent: Tuesday, July 06, 2010 5:52 PM
To: bioc-sig-sequencing at r-project.org
Subject: RE: Bioc-sig-sequencing Digest, Vol 28, Issue 30

Hi,
We have directional inserts to sequence (Illumina platform) and want to align
to either the sense or antisense strand of DNA one at a time.  Is there
alignment software to do this?

Lana Schaffer
Scripps Research Institute
San Diego, CA 92037
Bioinformtics