[Bioc-sig-seq] Genominator: strategy for combining multiple AlignedRead objects

[joseph franklin]

Kasper-
Many thanks for the quick help.  The problem was on my end (unsurprisingly)--after running debug, I realized that my script was loading the chrMap object incorrectly.  I had saved the vector for easy use, but was loading it:

chrMap<-load(file="chrMap.Robj")

rather than

load(file="chrMap.Robj")


Everything else seems to work--sorry for the confusion.

Joe