[Bioc-sig-seq] rtracklayer and all_mrna track

[Dario Strbenac]

Hello,

Does anyone have suggestions as to why this never finishes running ?

session <- browserSession("UCSC")
 ...            ...
q2 <- ucscTableQuery(session, "all_mrna", GenomicRanges(genome = "hg18"))
mrna <- getTable(q2)

The sessionInfo() is
R version 2.10.0 (2009-10-26) 
x86_64-pc-linux-gnu 

locale:
 [1] LC_CTYPE=en_AU.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_AU.UTF-8        LC_COLLATE=en_AU.UTF-8    
 [5] LC_MONETARY=C              LC_MESSAGES=en_AU.UTF-8   
 [7] LC_PAPER=en_AU.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_AU.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] rtracklayer_1.6.0 RCurl_1.3-0       bitops_1.0-4.1   

loaded via a namespace (and not attached):
[1] Biobase_2.6.0     Biostrings_2.14.5 BSgenome_1.14.1   IRanges_1.4.6    
[5] tools_2.10.0      XML_2.6-0

Thanks,
       Dario.