[Bioc-sig-seq] analyze Bowtie output with qa()

[Martin Morgan]

joseph <jdsandjd at yahoo.com> writes:

> Hi
> what do you use for the 'type' argument to analyze Bowtie output with qa()?
> the types in ShortRead_1.1.51 are 'SolexaExport', 'MAQMapShort' and 'fastq.

Bowtie qa is not currently supported but I'll add it asap and let you
know...

Martin

> Thanks
> Joseph
>
>
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Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
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