[Bioc-sig-seq] Rolexa, a new BioC package for calling bases off a Solexa sequencer
Patrick Aboyoun
paboyoun at fhcrc.org
Thu Jul 16 22:10:06 CEST 2009
I just wanted to draw people's attention to the Rolexa BioC package,
which is produced by Jacques Rougemont and his colleagues at
Bioinformatics & Biostatistics Core Facility, EPFL School of Life
Sciences, Lausanne, Switzerland. It provides an mclust (i.e.
model-based) alternative to Bustard in the Solexa data analysis pipeline
and fits within the IRanges/Biostrings/ShortRead BioC framework. For
more information on this package see
http://bioconductor.org/packages/2.5/bioc/html/Rolexa.html
Cheers,
Patrick
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