[Bioc-sig-seq] read paired end alignment results

[Wu, Xiwei]

Dear list,

Does readAligned function within ShortRead package support read in
paired-end alignment result? Also, does the coverage or pileup function
support paired-end information? Thanks.

Xiwei Wu
Director, Microarray Service, Functional Genomics Core
Associate Director, Bioinformatics Core
Assistant Research Professor
Department of Molecular Medicine
Beckman Research Institute
City of Hope


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