[Bioc-sig-seq] Genominator

Michael Muratet mmuratet at hudsonalpha.org
Tue Dec 22 23:44:40 CET 2009


Greetings

I am trying to install Genominator (and GenomeGraphs). I tried the  
usual:

source("http://bioconductor.org/biocLite.R")
biocLite("Genominator")
and it returned:
Running biocinstall version 2.3.14 with R version 2.8.0 Your version  
of R requires version 2.3 of Bioconductor.
Warning message: package ‘Genominator’ is not available
So I tried downloading the tarball from the website and R CMD INSTALL  
Genominator_1.0.2.tar.gz
and got:
{loading and cranking output} then
ERROR: Environment (text enclosed in {}) found in \title{...}.
The title must be plain text! ERROR: building help failed for package  
'Genominator' ** Removing '/Library/Frameworks/R.framework/Resources/ 
library/Genominator'
I think maybe there's an issue with the package, but I'm willing to  
accept I fouled up somewhere. Anybody have any suggestions?
sysinfo:
sessionInfo() R version 2.8.0 (2008-10-20) i386-apple-darwin8.11.1  
locale: en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8 attached  
base packages: [1] stats graphics grDevices utils datasets methods  
base loaded via a namespace (and not attached): [1] tools_2.8.0
Thanks
Mike

Michael Muratet, Ph.D.
Senior Scientist
HudsonAlpha Institute for Biotechnology
mmuratet at hudsonalpha.org
(256) 327-0473 (p)
(256) 327-0966 (f)

Room 4005
601 Genome Way
Huntsville, Alabama 35806



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